last update : june 2012
Public data retrieved in march 2010
| Accession | Master Protein | Description (curated) | Length | Localization (SC) | Localization (curated) | Calculated Pi PPDB | Calculated MW PPDB | ENV SC | STR SC | THY SC | Total SC | Function (putative) | MapManBin (PPDB) | Localization (TAIR) | ChloroP | TargetP | Curated localization (PPDB) | Aramemnon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AtCg00020 | AtCg00020 | Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core | 353 | THY | Ch/Th | 5.12 | 38.93 | 1.105 | 0 | 98.895 | 394 | PS PSII | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | undefined | C | thylakoid-integral | ||
| AtCg00065 | AtCg00065 | chloroplast gene encoding ribosomal protein s12. The gene is located in three distinct loci on the chloroplast genome and is transpliced to make one transcript. | 38 | STR-THY | Ch/S | 11.57 | 13.76 | 8.337 | 75.617 | 16.046 | 48 | translation stroma | 29.2.1.1.1.1 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit | undefined | C | plastid ribosome | ||
| AtCg00120 | AtCg00120 | Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast. | 507 | THY-ENV | Ch/Th | 5.18 | 55.32 | 17.601 | 9.661 | 72.737 | 1,599 | PS ATPase | 1.1.4 PS.lightreaction.ATP synthase | other (e.g. cytoplasm) | C | thylakoid-peripheral-stromal-side | ||
| AtCg00130 | AtCg00130 | ATPase F subunit. | 184 | THY | Ch/Th | 7.84 | 21.05 | 12.125 | 0 | 87.875 | 412 | PS ATPase | 1.1.4 PS.lightreaction.ATP synthase | other (e.g. cytoplasm) | C | thylakoid-integral | ||
| AtCg00140 | AtCg00140 | ATPase III subunit | 81 | THY | 4.94 | 7.97 | 0 | 0 | 100 | 21 | 1.1.4 PS.lightreaction.ATP synthase | secreted | C | thylakoid-integral | ||||
| AtCg00150 | AtCg00150 | Encodes a subunit of ATPase complex CF0, which is a proton channel that supplies the proton motive force to drive ATP synthesis by CF1 portion of the complex. | 249 | THY | 4.96 | 27.35 | 0 | 0 | 100 | 27 | 1.1.4 PS.lightreaction.ATP synthase | undefined | C | thylakoid-integral | ||||
| AtCg00160 | AtCg00160 | Chloroplast ribosomal protein S2 | 236 | STR | Ch/S | 9.7 | 26.9 | 3.987 | 96.013 | 0 | 92 | translation stroma | 29.2.1.1.1.1 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit | undefined | C | plastid ribosome | ||
| AtCg00170 | AtCg00170 | RNA polymerase beta' subunit-2 | 1,376 | STR | 9.41 | 156.36 | 0 | 100 | 0 | 17 | 27.2 RNA.transcription | undefined | C | plastid stroma | ||||
| AtCg00180 | AtCg00180 | RNA polymerase beta' subunit-1 | 680 | 8.76 | 78.58 | 0 | 100 | 0 | 5 | 27.2 RNA.transcription | undefined | C | plastid stroma | |||||
| AtCg00190 | AtCg00190 | Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. | 1,072 | 8.68 | 121.06 | 0 | 100 | 0 | 4 | 27.2 RNA.transcription | other (e.g. cytoplasm) | C | plastid stroma |