last update : june 2012
Public data retrieved in march 2010
| Accession | Master Protein | Description (curated) | Length | Localization (SC) | Localization (curated) | Calculated Pi PPDB | Calculated MW PPDB | ENV SC | STR SC | THY SC | Total SC | Function (putative) | MapManBin (PPDB) | Localization (TAIR) | ChloroP | TargetP | Curated localization (PPDB) | Aramemnon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AtCg00490 | AtCg00490 | large subunit of RUBISCO. | 479 | STR-ENV | Ch | 5.87 | 52.95 | 15.957 | 78.365 | 5.678 | 7,279 | metabolism carbon | 1.3.1 PS.calvin cyle.rubisco large subunit | other (e.g. cytoplasm) | C | plastid stroma | ||
| AtCg00500 | AtCg00500 | Encodes the carboxytransferase beta subunit of the Acetyl-CoA carboxylase (ACCase) complex in plastids. This complex catalyzes the carboxylation of acetyl-CoA to produce malonyl-CoA, the first committed step in fatty acid synthesis. | 488 | ENV | Ch/E/IM | 5.89 | 55.61 | 95.048 | 3.576 | 1.375 | 175 | metabolism lipid | 11.1.1 lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation | undefined | C | plastid stroma | ||
| AtCg00520 | AtCg00520 | Encodes a protein required for photosystem I assembly and stability. In cyanobacteria, loss of function mutation in this gene increases PSII/PSI ratio without any influence on photoautotrophic growth. | 184 | 9.61 | 21.4 | 0 | 0 | 100 | 6 | 29.8 protein assembly and cofactor ligation | undefined | C | plastid stroma | |||||
| AtCg00540 | AtCg00540 | Encodes cytochrome f apoprotein; involved in photosynthetic electron transport chain; encoded by the chloroplast genome and is transcriptionally repressed by a nuclear gene HCF2. | 320 | THY | Ch/Th | 8.34 | 35.35 | 11.496 | 0 | 88.504 | 301 | PS b6-F | 1.1.3 PS.lightreaction.cytochrome b6/f | undefined | C | thylakoid-integral | ||
| AtCg00560 | AtCg00560 | PSII L protein | 38 | THY | 4.52 | 4.47 | 0 | 0 | 100 | 56 | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | secreted | C | thylakoid-integral | ||||
| AtCg00580 | AtCg00580 | PSII cytochrome b559. There have been many speculations about the function of Cyt b559, but the most favored at present is that it plays a protective role by acting as an electron acceptor or electron donor under conditions when electron flow through | 83 | THY | Ch/Th | 4.83 | 9.39 | 4.55 | 0 | 95.45 | 160 | PS PSII | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | undefined | C | thylakoid-integral | ||
| AtCg00630 | AtCg00630 | Encodes subunit J of photosystem I. | 44 | 5.87 | 5 | 0 | 0 | 100 | 9 | 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits | secreted | C | thylakoid-integral | |||||
| AtCg00640 | AtCg00640 | encodes a chloroplast ribosomal protein L33, a constituent of the large subunit of the ribosomal complex | 66 | 9.78 | 7.69 | 0 | 100 | 0 | 9 | 29.2.1.1.1.2 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit | undefined | C | plastid ribosome | |||||
| AtCg00650 | AtCg00650 | chloroplast-encoded ribosomal protein S18 | 101 | ENV-STR | Ch/S | 12.16 | 12.06 | 51.449 | 37.548 | 11.003 | 40 | translation stroma | 29.2.1.1.1.1 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit | undefined | C | plastid ribosome | ||
| AtCg00660 | AtCg00660 | encodes a chloroplast ribosomal protein L20, a constituent of the large subunit of the ribosomal complex | 117 | ENV-STR | Ch/S | 11.89 | 14.16 | 57.81 | 42.19 | 0 | 16 | translation stroma | 29.2.1.1.1.2 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit | undefined | Y | C | plastid ribosome |