last update : june 2012
Public data retrieved in march 2010
| Accession | Master Protein | Description (curated) | Length | Localization (SC) | Localization (curated) | Calculated Pi PPDB | Calculated MW PPDB | ENV SC | STR SC | THY SC | Total SC | Function (putative) | MapManBin (PPDB) | Localization (TAIR) | ChloroP | TargetP | Curated localization (PPDB) | Aramemnon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AtCg00270 | AtCg00270 | PSII D2 protein | 353 | THY | Ch/Th | 5.45 | 39.54 | 2.639 | 0.083 | 97.278 | 495 | PS PSII | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | other (e.g. cytoplasm) | C | thylakoid-integral | ||
| AtCg00280 | AtCg00280 | chloroplast gene encoding a CP43 subunit of the photosystem II reaction center. promoter contains a blue-light responsive element. | 473 | THY | Ch/Th | 6.7 | 51.86 | 1.916 | 0 | 98.084 | 707 | PS PSII | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | undefined | C | thylakoid-integral | ||
| AtCg00330 | AtCg00330 | 30S chloroplast ribosomal protein S14 | 100 | STR-ENV | Ch/S | 11.23 | 11.74 | 28.554 | 71.446 | 0 | 32 | translation stroma | 29.2.1.1.1.1.14 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S14 | undefined | C | plastid ribosome | ||
| AtCg00340 | AtCg00340 | Encodes the D1 subunit of photosystem I and II reaction centers. | 734 | THY-ENV | Ch/Th | 6.88 | 82.47 | 20.28 | 0 | 79.72 | 378 | PS PSI | 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits | mitochondrion | C | thylakoid-integral | ||
| AtCg00350 | AtCg00350 | Encodes psaA protein comprising the reaction center for photosystem I along with psaB protein; hydrophobic protein encoded by the chloroplast genome. | 750 | THY-ENV | Ch/Th | 6.6 | 83.23 | 15.658 | 0 | 84.342 | 514 | PS PSI | 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits | other (e.g. cytoplasm) | C | thylakoid-integral | ||
| AtCg00380 | AtCg00380 | Chloroplast encoded ribosomal protein S4 | 201 | STR | Ch/S | 10.32 | 23.24 | 13.684 | 86.316 | 0 | 206 | translation stroma | 29.2.1.1.1.1 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit | undefined | C | plastid ribosome | ||
| AtCg00420 | AtCg00420 | Encodes NADH dehydrogenase subunit J. Its transcription is increased upon sulfur depletion. | 158 | 6.5 | 18.55 | 0 | 100 | 0 | 6 | 1.1.6 PS.lightreaction.NADH DH | undefined | C | thylakoid | |||||
| AtCg00430 | AtCg00430 | Encodes a protein which was originally thought to be part of photosystem II but its wheat homolog was later shown to encode for subunit K of NADH dehydrogenase. | 225 | 9.17 | 25.36 | 0 | 9.775 | 90.225 | 6 | 1.1.6 PS.lightreaction.NADH DH | undefined | C | thylakoid | |||||
| AtCg00470 | AtCg00470 | ATPase epsilon subunit | 132 | THY-ENV | Ch/Th | 5.83 | 14.49 | 20.632 | 2.151 | 77.217 | 98 | PS ATPase | 1.1.4 PS.lightreaction.ATP synthase | undefined | C | thylakoid-peripheral-stromal-side | ||
| AtCg00480 | AtCg00480 | chloroplast-encoded gene for beta subunit of ATP synthase | 498 | THY | Ch/Th & other | 5.38 | 53.93 | 15.289 | 9.523 | 75.188 | 2,300 | PS ATPase | 1.1.4 PS.lightreaction.ATP synthase | undefined | C | thylakoid-peripheral-stromal-side |