last update : june 2012
Public data retrieved in march 2010
| Accession | Master Protein | Description (curated) | Length | Localization (SC) | Localization (curated) | Calculated Pi PPDB | Calculated MW PPDB | ENV SC | STR SC | THY SC | Total SC | Function (putative) | MapManBin (PPDB) | Localization (TAIR) | ChloroP | TargetP | Curated localization (PPDB) | Aramemnon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G26742 | AT5G26742.1 | EMB1138 (EMBRYO DEFECTIVE 1138); ATP binding / ATP-dependent helicase | 747 | STR-ENV | Ch/E & Ch/S | 7.24 | 81 | 41.005 | 58.995 | 0 | 38 | RNA Binding ? | 27.5* RNA.DEAD/DEAH BOX helicase | chloroplast | Y | C | plastid stroma | |
| AT5G27240 | AT5G27240.1 | DNAJ heat shock N-terminal domain-containing protein | 1,104 | ENV-THY | Ch/E ? | 9.02 | 124.44 | 50.959 | 0 | 49.041 | 2 | chaperone and protease ? | 20.2.1 stress.abiotic.heat | other (e.g. cytoplasm) | - | |||
| AT5G27670 | AT5G27670.1 | HTA7; DNA binding | 150 | THY-ENV | other | 10.47 | 15.9 | 30.888 | 9.661 | 59.451 | 8 | DNA binding | 28.1.3 DNA.synthesis/chromatin structure.histone | undefined | Y | nucleus | ||
| AT5G28540 | AT5G28540.1 | BIP1; ATP binding | 669 | ENV-STR | Ch/E ? | 5.08 | 73.63 | 73.667 | 26.333 | 0 | 15 | chaperone and protease | 29.6 protein.folding | secreted | S | ER | ||
| AT5G28750 | AT5G28750.1 | thylakoid assembly protein, putative | 147 | ENV | Ch/E & Ch/Th | 9.22 | 15.71 | 100 | 0 | 0 | 5 | protein targeting | 29.3.3 protein.targeting.chloroplast | chloroplast | Y | C | thylakoid-integral | 1 |
| AT5G33320 | AT5G33320.1 | CUE1 (CAB UNDEREXPRESSED 1); antiporter/ triose-phosphate transmembrane transporter | 408 | ENV | Ch/E/IM | 10.16 | 44.22 | 100 | 0 | 0 | 7 | transporter Pi/PEP | 34.8 transport.metabolite transporters at the envelope membrane | chloroplast | Y | C | envelope-inner-integral | 6 |
| AT5G38410 | AT5G38410.1 | ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) | 181 | STR-ENV | Ch/S & other | 8.21 | 20.28 | 18.158 | 76.988 | 4.854 | 1,003 | metabolism carbon | 1.3.2 PS.calvin cyle.rubisco small subunit | chloroplast | Y | C | plastid stroma | |
| AT5G38430 | AT5G38430.1 | ribulose bisphosphate carboxylase small chain 1B / RuBisCO small subunit 1B (RBCS-1B) (ATS1B) | 181 | STR-ENV | Ch/S | 7.58 | 20.28 | 18.904 | 76.686 | 4.41 | 851 | metabolism carbon | 1.3.2 PS.calvin cyle.rubisco small subunit | chloroplast | Y | C | plastid stroma | |
| AT5G38520 | AT5G38520.1 | hydrolase, alpha/beta fold family protein | 362 | ENV-THY | Ch/E/IM | 6.54 | 39.57 | 77.597 | 0 | 22.403 | 16 | hydrolase ? | 35.1 not assigned.no ontology | chloroplast | Y | C | thylakoid | |
| AT5G38660 | AT5G38660.1 | APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT) | 286 | THY-ENV | Ch/E & Ch/Th | 8.6 | 31.43 | 20.621 | 0 | 79.379 | 18 | unknown | 35.2 not assigned.unknown | chloroplast | Y | C | thylakoid | 2 |