last update : june 2012
Public data retrieved in march 2010
| Accession | Master Protein | Description (curated) | Length | Localization (SC) | Localization (curated) | Calculated Pi PPDB | Calculated MW PPDB | ENV SC | STR SC | THY SC | Total SC | Function (putative) | MapManBin (PPDB) | Localization (TAIR) | ChloroP | TargetP | Curated localization (PPDB) | Aramemnon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AtCg00670 | AtCg00670 | Encodes the only ClpP (caseinolytic protease) encoded within the plastid genome. Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). Part of the 350 kDa chloroplast Clp complex. The name reflects nomenclature described i | 196 | STR-ENV | Ch/E & Ch/S | 4.97 | 22.09 | 24.226 | 75.774 | 0 | 33 | chaperone and protease | 29.5.5 protein.degradation.serine protease | other (e.g. cytoplasm) | C | plastid stroma; thylakoid-inner-peripheral-stromal-side | ||
| AtCg00740 | AtCg00740 | RNA polymerase alpha subunit | 329 | STR-THY | 7.19 | 38.13 | 0 | 59.391 | 40.609 | 17 | 27.2 RNA.transcription | undefined | C | plastid stroma | ||||
| AtCg00750 | AtCg00750 | 30S chloroplast ribosomal protein S11 | 138 | STR | Ch/S | 12.24 | 15.02 | 14.907 | 85.093 | 0 | 113 | translation stroma | 29.2.1.1.1.1 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit | undefined | Y | C | plastid ribosome | |
| AtCg00760 | AtCg00760 | encodes a chloroplast ribosomal protein L36, a constituent of the large subunit of the ribosomal complex | 37 | STR-ENV | Ch/S | 11.91 | 4.46 | 39.004 | 60.996 | 0 | 15 | translation stroma | 29.2.1.1.1.2 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit | undefined | C | plastid ribosome | ||
| AtCg00770 | AtCg00770 | chloroplast 30S ribosomal protein S8 | 134 | STR-ENV | Ch/S | 10.93 | 15.48 | 20.011 | 63.483 | 16.507 | 115 | translation stroma | 29.2.1.1.1.1 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit | other (e.g. cytoplasm) | C | plastid ribosome | ||
| AtCg00780 | AtCg00780 | encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex | 122 | STR-THY | Ch/S | 9.38 | 13.58 | 18.647 | 54.435 | 26.918 | 75 | translation stroma | 29.2.1.1.1.2 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit | undefined | C | plastid ribosome | ||
| AtCg00790 | AtCg00790 | chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit | 135 | STR-ENV | Ch/S | 11.62 | 15.29 | 44.423 | 55.577 | 0 | 34 | translation stroma | 29.2.1.1.1.2 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit | undefined | C | plastid ribosome | ||
| AtCg00800 | AtCg00800 | encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex | 218 | STR-ENV | Ch/S | 9.51 | 25.18 | 17.616 | 82.384 | 0 | 454 | translation stroma | 29.2.1.1.1.1 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit | undefined | C | plastid ribosome | ||
| AtCg00810 | AtCg00810 | encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex | 160 | STR-ENV | Ch/S | 9.69 | 18.58 | 24.198 | 71.144 | 4.657 | 65 | translation stroma | 29.2.1.1.1.2 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit | undefined | C | plastid ribosome | ||
| AtCg00820 | AtCg00820 | Encodes a 6.8-kDa protein of the small ribosomal subunit. | 92 | STR-ENV | Ch/S | 10.77 | 10.57 | 32.97 | 67.03 | 0 | 23 | translation stroma | 29.2.1.1.1.1 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit | undefined | C | plastid ribosome |