last update : june 2012
Public data retrieved in march 2010
| Accession | Master Protein | Description (curated) | Length | Localization (SC) | Localization (curated) | Calculated Pi PPDB | Calculated MW PPDB | ENV SC | STR SC | THY SC | Total SC | Function (putative) | MapManBin (PPDB) | Localization (TAIR) | ChloroP | TargetP | Curated localization (PPDB) | Aramemnon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AtCg00580 | AtCg00580 | PSII cytochrome b559. There have been many speculations about the function of Cyt b559, but the most favored at present is that it plays a protective role by acting as an electron acceptor or electron donor under conditions when electron flow through | 83 | THY | Ch/Th | 4.83 | 9.39 | 4.55 | 0 | 95.45 | 160 | PS PSII | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | undefined | C | thylakoid-integral | ||
| AtCg00680 | AtCg00680 | encodes for CP47, subunit of the photosystem II reaction center. | 508 | THY | Ch/Th | 6.39 | 56.03 | 1.515 | 0 | 98.485 | 604 | PS PSII | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | undefined | C | thylakoid-integral | ||
| AtCg00710 | AtCg00710 | Encodes a 8 kD phosphoprotein that is a component of the photosystem II oxygen evolving core. Its exact molecular function has not been determined but it may play a role in mediating electron transfer between the secondary quinone acceptors, QA and Q | 73 | THY | 6.03 | 7.7 | 0 | 0 | 100 | 251 | 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits | undefined | C | thylakoid-integral | ||||
| AtCg00720 | AtCg00720 | Encodes the cytochrome b(6) subunit of the cytochrome b6f complex. | 215 | THY | Ch/Th | 8.88 | 24.15 | 6.202 | 0 | 93.798 | 195 | PS b6-F | 1.1.3 PS.lightreaction.cytochrome b6/f | other (e.g. cytoplasm) | C | thylakoid-integral | ||
| AtCg00730 | AtCg00730 | A chloroplast gene encoding subunit IV of the cytochrome b6/f complex | 160 | THY | Ch/Th | 6.55 | 17.43 | 4.085 | 0 | 95.915 | 159 | PS b6-F | 1.1.3 PS.lightreaction.cytochrome b6/f | other (e.g. cytoplasm) | C | thylakoid-integral | ||
| AtCg00740 | AtCg00740 | RNA polymerase alpha subunit | 329 | STR-THY | 7.19 | 38.13 | 0 | 59.391 | 40.609 | 17 | 27.2 RNA.transcription | undefined | C | plastid stroma | ||||
| AtCg00780 | AtCg00780 | encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex | 122 | STR-THY | Ch/S | 9.38 | 13.58 | 18.647 | 54.435 | 26.918 | 75 | translation stroma | 29.2.1.1.1.2 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit | undefined | C | plastid ribosome | ||
| AtCg01060 | AtCg01060 | Encodes the PsaC subunit of photosystem I. | 81 | THY | Ch/Th | 6.67 | 9.03 | 5.556 | 0.869 | 93.575 | 84 | PS PSI | 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits | undefined | C | thylakoid-peripheral-stromal-side | ||
| AtCg01070 | AtCg01070 | NADH dehydrogenase ND4L | 101 | THY | 8.73 | 11.28 | 0 | 0 | 100 | 10 | 1.1.6 PS.lightreaction.NADH DH | secreted | C | thylakoid-integral | ||||
| AtCg01110 | AtCg01110 | Encodes the 49KDa plastid NAD(P)H dehydrogenase subunit H protein. Its transcription is regulated by an ndhF-specific plastid sigma factor, SIG4. | 393 | STR-THY | 5.39 | 45.5 | 0 | 53.217 | 46.783 | 49 | 1.1.6 PS.lightreaction.NADH DH | undefined | C | thylakoid |