last update : june 2012

Public data retrieved in march 2010



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Thylakoid protein groups list (220)


Accession Master Protein Description (curated) Length Localization (SC) Localization (curated) Calculated Pi PPDB Calculated MW PPDB ENV SC STR SC THY SC Total SC Function (putative) MapManBin (PPDB) Localization (TAIR) ChloroP TargetP Curated localization (PPDB) Aramemnon
AT4G09650 AT4G09650.1 ATP synthase delta chain, chloroplast, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative 234 THY-ENV Ch 9.04 25.66 20.334 4.403 75.263 175 PS ATPase 1.1.4 PS.lightreaction.ATP synthase chloroplast Y C thylakoid-peripheral-stromal-side
AT4G10340 AT4G10340.1 LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5); chlorophyll binding 280 THY Ch/Th 5.99 30.15 1.767 0 98.233 783 PS LHC 1.1.1.1 PS.lightreaction.photosystem II.LHC-II chloroplast Y C thylakoid-integral 2
AT4G12800 AT4G12800.1 PSAL (photosystem I subunit L) 219 THY Ch/Th 9.85 23.05 4.821 0.335 94.844 248 PS PSI 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits chloroplast Y C thylakoid-integral 2
AT4G13500 AT4G13500.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G05310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41162.1) 125 THY Ch/E ? 9.06 13.81 5.185 0 94.815 24 unknown 35.2 not assigned.unknown chloroplast Y C - 1
AT4G13670 AT4G13670.1 PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5); heat shock protein binding / unfolded protein binding 387 ENV-THY Ch/E & Ch/Th 4.84 44.02 83.153 0 16.847 23 unknown 26.29* misc.DnaJ domain with unknown function chloroplast Y C -
AT4G14210 AT4G14210.1 PDS3 (PHYTOENE DESATURASE) 566 ENV-THY Ch/E/IM 6.07 62.96 84.383 0 15.617 33 metabolism vitamin and pigment 16.1.4.2 secondary metabolism.isoprenoids.carotenoids.phytoene dehydrogenase undefined Y C -
AT4G20360 AT4G20360.1 AtRABE1b/AtRab8D (Arabidopsis Rab GTPase homolog E1b); translation elongation factor 476 STR-THY Ch & other 5.83 51.63 8.199 72.712 19.089 1,376 translation stroma / signalling / SNARE effector 29.2.4 protein.synthesis.elongation chloroplast Y C plastid stroma
AT4G21280 AT4G21280.1 PSBQ/PSBQ-1/PSBQA; calcium ion binding 223 THY Ch/Th/Lum 9.64 23.79 5.352 0 94.648 314 PS PSII OEE 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits chloroplast Y C thylakoid-peripheral-lumenal-side
AT4G22240 AT4G22240.1 plastid-lipid associated protein PAP, putative 310 THY Ch 5.67 33.65 0 0 100 17 PAP_fibrillin 26.31* misc.fibrillins chloroplast Y C plastoglobules; thylakoid-peripheral-stromal-side
AT4G22890 AT4G22890.1 PGR5-LIKE A 324 THY 5.2 35.72 0 0.871 99.129 49 1.1.40 PS.lightreaction.cyclic electron flow-chlororespiration chloroplast Y C thylakoid-integral 2