last update : june 2012

Public data retrieved in march 2010



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AT5G53860 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT5G53860
Master Protein AT5G53860.1
Description (curated) EMB2737 (EMBRYO DEFECTIVE 2737)
Calculated MW (PPDB) 46.15
Calculated PI (PPDB) 8.57
Length 402
Curated Annotation
Description (curated) EMB2737 weak similarity to Golgin subfamily proteins /
Function (curated) vesicular trafficking ?
Localization (SC) ENV
Localization (curated) Ch/E & other
Localization (validated) Yes
Envelope spectral count 100.00
Stroma spectral count 0.00
Thylakoid spectral count 0.00
Total spectral count 15
References (Identities = 39/153 (25%), Positives = 70/153 (45%)), FUNCTION: May play a role in vesicular transport from the trans-Golgi. SUBCELLULAR LOCATION: Cytoplasm. Golgi apparatus; Golgi membrane; peripheral membrane protein. conserved plant protein. EMB2737 (EMBRYO DEFECTIVE 2737)
Publication (PPDB)

Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
SLEAEVTK 875.45998 0.23 33.4 2
LIQNVTQFADAQFK 1,621.84636 0.45 96.6 5
TVLLNAQR 913.53448 0.24 51.5 2
AREDPVIVK 1,025.58690 0.19 34.7 3
KSLEAEVTK 1,003.55493 0.19 35.6 1
VEEMLEQK 1,020.47972 0.17 25.3 1
GFGIPEFISK 1,093.58073 0.47 52.9 5
VRPYIQDSSMAVLPQPILLK 2,283.26602 0.45 34.9 1