last update : june 2012

Public data retrieved in march 2010



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AT5G60600 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT5G60600
Master Protein AT5G60600.1
Description (curated) GcpE (CHLOROPLAST BIOGENESIS 4); 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Calculated MW (PPDB) 82.25
Calculated PI (PPDB) 6.01
Length 741
Curated Annotation
Description (curated)
Function (curated)
Localization (SC) STR
Localization (curated)
Localization (validated) Yes
Envelope spectral count 0.00
Stroma spectral count 100.00
Thylakoid spectral count 0.00
Total spectral count 151
References -
Publication (PPDB)

Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
VNPGNFADR 988.47260 0.24 36.8 1
DGSVLMSISLDQLK 1,536.77049 0.48 106.3 7
VAECFDKIR 1,127.52806 0.30 58.4 7
GIAMTEATDALIGLIK 1,615.88544 0.60 73.2 1
TVMVGNVALGSEHPIR 1,710.87224 0.32 115.1 5
VNPGNFADRR 1,144.57370 0.22 25.7 2
VSLTEPPEEEIDPCRR 1,916.87852 0.35 82.2 5
IGTNHGSLSDR 1,155.56322 0.16 68.7 18
ASNPVIMVQAYR 1,379.68669 0.36 54.8 2
GIAMTEATDALIGLIK 1,647.87528 0.52 135.4 9
NIDATMILHDVPFTEDK 1,989.93533 0.47 56.9 1
TGDLPVQK 856.46541 0.19 42.7 1
GDEPYEELEILK 1,433.69254 0.45 57.4 1
SAIGIGTLLQDGLGDTIR 1,798.97882 0.55 126.7 9
NTSFNLLQGCR 1,299.58771 0.41 72 1
DLATVDSILLR 1,214.68703 0.50 77.6 10
LQQGVAPFEEK 1,244.64004 0.30 50.3 9
GMVESAFEFAR 1,274.56007 0.39 85.8 11
TLFDLQEISAEIR 1,533.80383 0.54 81.8 4
IQTMTTSDTK 1,156.52818 0.13 52.8 7
ELPPVDDQVAR 1,237.63023 0.28 53.9 10
IMSYYGDSPR 1,219.51791 0.26 42.4 4
LVVGMPFKDLATVDSILLR 2,118.17580 0.55 52.4 3
EGEEVDYR 995.41956 0.21 27 2
RTGDLPVQK 1,012.56651 0.17 28.5 1
DITGTVDEVMR 1,266.57616 0.34 85.5 7
IQTMTTSDTKDITGTVDEVMR 2,405.09378 0.33 88 5
IADKGADIVR 1,056.59271 0.19 68.7 15