last update : june 2012

Public data retrieved in march 2010



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AtCg00350 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AtCg00350
Master Protein AtCg00350
Description (curated) Encodes psaA protein comprising the reaction center for photosystem I along with psaB protein; hydrophobic protein encoded by the chloroplast genome.
Calculated MW (PPDB) 83.23
Calculated PI (PPDB) 6.6
Length 750
Curated Annotation
Description (curated) PSAA Photosystem I reaction center subunit Ia, chloroplast encoded /
Function (curated) PS PSI
Localization (SC) THY-ENV
Localization (curated) Ch/Th
Localization (validated) Yes
Envelope spectral count 15.66
Stroma spectral count 0.00
Thylakoid spectral count 84.34
Total spectral count 514
References subunit of photosystem I comprising the reaction center for photosystem /
Publication (PPDB)

Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
ILVDRDPIK 1,067.63386 0.27 44.8 102
LIPDKANLGFR 1,242.70840 0.33 51.8 24
GPFTGQGHK 927.45622 0.15 58.8 13
LIPDKANLGFRFPCDGPGR 2,120.04723 0.42 50.1 2
DILEAHK 824.43919 0.19 37.1 19
ANLGFRFPCDGPGR 1,553.70444 0.41 78.5 17
SPEPEVK 784.39665 0.15 60.9 68
YNDLLDR 907.43993 0.29 60.8 47
LKVAPATQPR 1,079.64510 0.18 35.1 10
TNWGIGHGIK 1,081.56683 0.28 44.3 2
EIPLPHEFILNR 1,476.80885 0.43 74.8 56
IIRSPEPEVK 1,208.67644 0.33 52 32
MIIRSPEPEVK 1,371.70676 0.34 29.6 1
VAPATQPR 838.46608 0.12 60.7 59
DILEAHKGPFTGQGHK 1,733.88486 0.25 79.9 14
DYDPTNR 879.37225 0.17 23.6 2
GIQITSGFFQIWR 1,551.81975 0.55 85.6 4
YSEFLTFR 1,061.51816 0.42 54.6 80
IIRSPEPEVK 1,166.66588 0.22 34.4 4
DYDPTNRYNDLLDR 1,768.80162 0.38 35.9 2
TSFEEWAKPGHFSR 1,677.78990 0.34 53.7 3
FPCDGPGR 895.34938 0.25 56.6 7
ALSIIQGR 856.51302 0.30 56 61