last update : june 2012

Public data retrieved in march 2010



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AtCg00480 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AtCg00480
Master Protein AtCg00480
Description (curated) chloroplast-encoded gene for beta subunit of ATP synthase
Calculated MW (PPDB) 53.93
Calculated PI (PPDB) 5.38
Length 498
Curated Annotation
Description (curated) ATPB (CF1b) ATP synthase beta subunit, chloroplast encoded (EC 3.6.3.14) /
Function (curated) PS ATPase
Localization (SC) THY
Localization (curated) Ch/Th & other
Localization (validated) Yes
Envelope spectral count 15.29
Stroma spectral count 9.52
Thylakoid spectral count 75.19
Total spectral count 2300
References F1 sector subunit beta
Publication (PPDB)

Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
TREGNDLYMEMK 1,533.64391 0.20 46.4 4
RTNPTTSNPEVSIR 1,612.81686 0.26 101.6 72
ATNLEMESKLKK 1,390.74895 0.22 64 1
IFNVLGEPVDNLGPVDTRTTSPIHK 2,718.43401 0.44 66.2 1
AVAMSATEGLK 1,108.54338 0.21 75.2 92
DTLGQEINVTCEVQQLLGNNR 2,391.13354 0.62 102.3 17
AVAMSATEGLKR 1,264.64448 0.18 97.8 96
RGMDVVDMGNPLSVPVGGATLGR 2,361.14159 0.40 115.6 34
GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR 3,713.87878 0.54 117.1 5
TVLIMELINNIAK 1,470.84793 0.64 83.7 3
TVLIMELINNIAK 1,486.84285 0.56 96.7 23
MRVGLTALTMAEYFR 1,821.87529 0.41 70.3 4
TREGNDLYMEMK 1,549.63882 0.20 69.7 28
GMDVVDMGNPLSVPVGGATLGR 2,157.05572 0.47 123.3 4
VALVYGQMNEPPGAR 1,616.79800 0.30 111 20
TREGNDLYMEMKESGVINEQNLAESK 3,048.36511 0.31 112.4 13
TNPTTSNPEVSIREKK 1,799.93770 0.20 45.7 1
IAQIIGPVLDVAFPPGKMPNIYNALVVK 3,008.67717 0.56 78.9 13
SAPAFIELDTK 1,190.61827 0.38 74.9 66
IVGEEHYETAQQVK 1,629.79979 0.22 88.2 69
YKELQDIIAILGLDELSEEDR 2,461.25873 0.62 60.7 3
IAQIIGPVLDVAFPPGK 1,734.00792 0.55 116.6 103
EGNDLYMEMKESGVINEQNLAESK 2,743.23157 0.43 62.6 1
IFNVLGEPVDNLGPVDTR 1,954.01592 0.52 135.2 167
EGNDLYMEMKESGVINEQNLAESK 2,791.21632 0.35 96.6 19
GRDTLGQEINVTCEVQQLLGNNR 2,604.25610 0.53 117.1 13
YKELQDIIAILGLDELSEEDRLTVAR 3,001.59709 0.59 135.3 27
TNPTTSNPEVSIREK 1,671.84274 0.23 62.4 2
ELQDIIAILGLDELSEEDR 2,170.10045 0.68 126.9 6
FVQAGSEVSALLGR 1,432.76735 0.53 109.9 144
EGNDLYMEMKESGVINEQNLAESK 2,759.22649 0.34 70.6 4
EGNDLYMEMK 1,276.49512 0.22 42.7 3
VALVYGQMNEPPGAR 1,632.79292 0.31 124.1 70
MPSAVGYQPTLSTEMGTLQER 2,327.07730 0.37 118.4 5
TTSPIHK 782.42865 0.11 30 5
VVDLLAPYR 1,044.59674 0.42 69.3 54
MPSAVGYQPTLSTEMGTLQER 2,359.06714 0.37 145.1 55
GRDTLGQEINVTCEVQQLLGNNRVR 2,859.42561 0.50 131.6 2
TREGNDLYMEMKESGVINEQNLAESK 3,032.37019 0.32 84.7 2
AHGGVSVFGGVGER 1,327.66319 0.28 120.9 22
EGNDLYMEMKESGVINEQNLAESK 2,775.22140 0.35 70.8 2
MPSAVGYQPTLSTEMGTLQER 2,343.07222 0.36 135.1 15
VGLTALTMAEYFR 1,502.74387 0.47 100.5 67
MPNIYNALVVK 1,276.68489 0.39 51.8 19
IGLFGGAGVGK 974.55482 0.37 63 46
VGLTALTMAEYFRDVNEQDVLLFIDNIFR 3,433.72269 0.73 155 6
GMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTR 4,109.05600 0.63 131.4 5
VGLTALTMAEYFR 1,470.75403 0.54 51 1
AVAMSATEGLKR 1,248.64957 0.17 68 20
EGNDLYMEMK 1,292.49004 0.23 58.1 17
GMDVVDMGNPLSVPVGGATLGR 2,189.04556 0.43 119.7 18
AVAMSATEGLK 1,076.55354 0.27 64.9 2
GMDVVDMGNPLSVPVGGATLGR 2,173.05064 0.43 120.1 14
GMDVVDMGNPLSVPVGGATLGR 2,141.06081 0.50 124.7 4
TNPTTSNPEVSIR 1,414.70520 0.25 83.8 91
ATNLEMESK 1,021.47498 0.20 55 3
AVAMSATEGLKR 1,232.65465 0.24 58.4 3
TREGNDLYMEMKESGVINEQNLAESK 3,016.37528 0.32 89.5 2
ELQDIIAILGLDELSEEDRLTVAR 2,710.43881 0.63 113.7 10
SAPAFIELDTKLSIFETGIK 2,179.17757 0.52 32.9 1
ESGVINEQNLAESK 1,516.73685 0.27 92.6 63
MPNIYNALVVK 1,260.68997 0.46 27.4 1
GIYPAVDPLDSTSTMLQPR 2,060.02481 0.50 93.4 6
IGLFGGAGVGKTVLIMELINNIAK 2,443.38712 0.63 34.2 1
GFNLILSGEFDSLPEQAFYLVGNIDEATAK 3,257.61310 0.72 117.4 7
MPNIYNALVVK 1,292.67981 0.41 79.1 33
YVGLAETIR 1,020.56035 0.33 28.1 2
EGNDLYMEMK 1,260.50020 0.22 38.6 6
DVNEQDVLLFIDNIFR 1,948.98938 0.73 132.9 72
IAQIIGPVLDVAFPPGKMPNIYNALVVK 2,976.68733 0.61 59.6 2
LSIFETGIK 1,006.56986 0.40 74 76
IAQIIGPVLDVAFPPGKMPNIYNALVVK 2,992.68225 0.57 84.9 5
RGMDVVDMGNPLSVPVGGATLGR 2,329.15175 0.39 56.8 1
MPSAVGYQPTLSTEMGTLQER 2,311.08238 0.39 90.6 1
KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR 3,841.97374 0.54 154.1 22
RGMDVVDMGNPLSVPVGGATLGR 2,345.14667 0.39 82 8
ATNLEMESK 1,053.46481 0.15 60.2 82
IVGEEHYETAQQVKQTLQR 2,256.14980 0.31 42.4 1
GIYPAVDPLDSTSTMLQPR 2,076.01973 0.44 104.6 22
VALVYGQMNEPPGAR 1,600.80308 0.36 82 2
GIYPAVDPLDSTSTMLQPR 2,092.01465 0.44 143.6 64
VVDLLAPYRR 1,200.69784 0.35 56.1 21
AVAMSATEGLK 1,092.54846 0.20 61.9 26
VGLTALTMAEYFR 1,486.74895 0.46 98 23
ATNLEMESK 1,037.46989 0.15 48.8 15
GMDVVDMGNPLSVPVGGATLGR 2,205.04048 0.44 127.2 92
TVLIMELINNIAK 1,502.83777 0.59 102.5 76
AVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 3,451.67441 0.42 52 2
RTNPTTSNPEVSIREK 1,869.95441 0.23 51.6 9
FLSQPFFVAEVFTGSPGK 1,956.99846 0.56 70.7 2