last update : june 2012

Public data retrieved in march 2010



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AtCg00490 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AtCg00490
Master Protein AtCg00490
Description (curated) large subunit of RUBISCO.
Calculated MW (PPDB) 52.95
Calculated PI (PPDB) 5.87
Length 479
Curated Annotation
Description (curated) RBL (RBCL) RuBisCO large subunit, chloroplast encoded (EC 4.1.1.39) /
Function (curated) metabolism carbon
Localization (SC) STR-ENV
Localization (curated) Ch
Localization (validated) Yes
Envelope spectral count 15.96
Stroma spectral count 78.37
Thylakoid spectral count 5.68
Total spectral count 7279
References large subunit of RUBISCO.
Publication (PPDB)

Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
LSGGDHIHAGTVVGK 1,446.75786 0.22 99.6 263
GIFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHP 6,352.17430 0.69 121.7 6
LEGDRESTLGFVDLLR 1,818.94751 0.49 77.1 221
ELGVPIVMHDYLTGGFTANTSLSHYCR 2,980.42107 0.54 135.1 4
LEDLRIPPAYTK 1,414.78198 0.34 68.2 73
ALAALRLEDLR 1,239.72987 0.41 50.9 103
TFQGPPHGIQVER 1,464.74731 0.29 102.8 310
AMHAVIDRQKNHGMHFR 2,094.99518 0.18 28.9 1
CYHIEPVPGEETQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFK 5,137.39275 0.81 131.1 6
DDYVEKDR 1,038.46178 0.15 59.4 146
GHYLNATAGTCEEMIKR 1,956.86690 0.25 121.5 67
SQAETGEIKGHYLNATAGTCEEMIKR 2,900.32794 0.26 79.1 3
GGLDFTK 736.37552 0.27 57.8 56
PLLGCTIKPK 1,068.63650 0.32 46.8 4
AVYECLR 852.41634 0.31 54.9 4
DRFLFCAEAIYK 1,522.71256 0.49 114.1 57
NHGMHFR 897.40276 0.14 37 7
VTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDR 3,853.86456 0.66 125 64
WSPELAAACEVWK 1,536.69183 0.52 72.3 5
AMHAVIDR 927.45961 0.14 43.7 85
DLAVEGNEIIREACK 1,706.81444 0.37 118 66
GHYLNATAGTCEEMIKR 1,972.86182 0.26 132 131
ALRLSGGDHIHAGTVVGK 1,786.98013 0.27 85.7 7
GHYLNATAGTCEEMIKR 1,892.88724 0.36 104.2 3
LEGDRESTLGFVDLLRDDYVEK 2,568.27068 0.48 61.9 39
LTYYTPEYETKDTDILAAFR 2,409.17396 0.48 121.9 53
YGRPLLGCTIKPK 1,444.82239 0.32 58.8 10
ELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHIHR 4,213.04723 0.45 97.3 5
NEGRDLAVEGNEIIREACK 2,163.02251 0.33 84 10
QKNHGMHFR 1,153.55629 0.19 32.9 1
AVYECLRGGLDFTKDDENVNSQPFMR 3,083.35997 0.43 118.8 28
VLAKALR 769.51736 0.17 55.4 11
NHGMHFRVLAK 1,340.67712 0.22 57.6 1
LSGGDHIHAGTVVGKLEGDR 2,017.03401 0.30 97.9 6
GIFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHP 6,368.16922 0.66 131.4 2
ELGVPIVMHDYLTGGFTANTSLSHYCR 3,060.39564 0.52 126.4 46
DLAVEGNEIIREACKWSPELAAACEVWK 3,129.52623 0.70 32 1
EYKLTYYTPEYETK 1,826.86140 0.37 84.7 3
GGLDFTKDDENVNSQPFMR 2,168.97961 0.40 123.3 9
QKNHGMHFR 1,185.54613 0.09 58.2 107
AVYECLR 900.40108 0.29 44.9 66
LSGGDHIHAGTVVGKLEGDRESTLGFVDLLR 3,247.69481 0.45 79.2 3
LTYYTPEYETK 1,406.66054 0.34 70.9 194
VALEACVQAR 1,058.55421 0.40 83.8 9
TFQGPPHGIQVERDKLNK 2,063.09116 0.24 41.9 2
AMHAVIDRQK 1,199.60806 0.11 54.4 22
AVYECLRGGLDFTKDDENVNSQPFMR 3,067.36505 0.42 55 3
EITFNFPTIDK 1,323.67104 0.47 65 84
EACKWSPELAAACEVWK 1,919.89093 0.52 80.3 1
WSPELAAACEVWK 1,488.70709 0.54 97.9 2
ELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHIHR 4,229.04214 0.51 147.1 9
NHGMHFR 929.39259 0.11 40.6 41
GGLDFTKDDENVNSQPFMR 2,200.96945 0.40 136.5 313
CYHIEPVPGEETQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFK 5,121.39783 0.79 83.2 1
VALEACVQAR 1,106.53896 0.35 94.3 442
TFQGPPHGIQVERDK 1,707.86922 0.24 77.8 32
DTDILAAFR 1,020.52399 0.55 82.9 699
ASVGFKAGVKEYK 1,382.75571 0.24 31.6 1
EITFNFPTIDKLDGQE 1,865.90466 0.60 97.9 488
GGLDFTKDDENVNSQPFMR 2,184.97453 0.36 84.7 93
DLAVEGNEIIR 1,227.64586 0.50 103.1 899
AGVKEYKLTYYTPEYETK 2,182.08333 0.33 105.9 2
DDENVNSQPFMR 1,466.60957 0.26 92.5 73
AMHAVIDR 911.46469 0.18 56.5 12
NEGRDLAVEGNEIIR 1,683.85393 0.31 86.9 106
VALEACVQARNEGR 1,562.74702 0.25 94.2 18
DDENVNSQPFMR 1,450.61466 0.32 95.7 11
ALAALRLEDLRIPPAYTK 2,010.16254 0.46 41.8 6
GHYLNATAGTCEEMIK 1,736.78613 0.38 113.9 5
YGRPLLGCTIKPK 1,492.80713 0.29 64.5 98
AGVKEYK 793.43335 0.10 56.6 42
AMHAVIDR 943.45453 0.18 61.3 274
ESTLGFVDLLRDDYVEKDR 2,269.12257 0.49 110 124
YGRPLLGCTIK 1,267.65941 0.33 60 14
SQAETGEIK 961.47160 0.15 71.3 190
ESTLGFVDLLRDDYVEK 1,997.99452 0.51 112.2 64
DDENVNSQPFMR 1,482.60449 0.27 95.7 165
ESTLGFVDLLR 1,248.67136 0.54 88.5 252
AMHAVIDRQKNHGMHFR 2,110.99010 0.19 51.2 3
PLLGCTIKPK 1,116.62125 0.31 66.4 110
QKNHGMHFR 1,169.55121 0.10 40.1 10
AMHAVIDRQKNHGMHFR 2,047.01042 0.25 30.7 1
FLFCAEAIYK 1,203.59976 0.51 73.4 4
FLFCAEAIYKSQAETGEIK 2,195.04555 0.50 87.9 3
SQAETGEIKGHYLNATAGTCEEMIK 2,760.22176 0.30 106.3 11
SQAETGEIKGHYLNATAGTCEEMIKR 2,916.32286 0.28 135.9 58
GHYLNATAGTCEEMIK 1,816.76071 0.29 133.6 56
GHYLNATAGTCEEMIKR 1,908.88216 0.27 32.3 1
IPPAYTK 788.44322 0.19 44.4 34
NHGMHFR 913.39768 0.12 31.8 14
GRCYHIEPVPGEETQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFK 5,350.51530 0.76 72.9 1
WSPELAAACEVWKEITFNFPTIDK 2,794.36757 0.72 81.5 2
FLFCAEAIYK 1,251.58450 0.55 61.5 119
LGLSAKNYGR 1,077.59303 0.24 71.2 12
AVYECLRGGLDFTK 1,618.76604 0.40 81.6 22
DNGLLLHIHR 1,186.65706 0.30 81.9 176
GHYLNATAGTCEEMIK 1,800.76579 0.28 112.8 27
ELGVPIVMHDYLTGGFTANTSLSHYCR 3,044.40073 0.46 115.6 5