last update : june 2012

Public data retrieved in march 2010



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AtCg00790 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AtCg00790
Master Protein AtCg00790
Description (curated) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit
Calculated MW (PPDB) 15.29
Calculated PI (PPDB) 11.62
Length 135
Curated Annotation
Description (curated) RPL16 50S ribosomal protein L16, chloroplast encoded /
Function (curated) translation stroma
Localization (SC) STR-ENV
Localization (curated) Ch/S
Localization (validated) Yes
Envelope spectral count 44.42
Stroma spectral count 55.58
Thylakoid spectral count 0.00
Total spectral count 34
References RK16
Publication (PPDB)

Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
YALQTLEPAWITSR 1,647.86203 0.51 36.2 3
ILYEMGGVPENIAR 1,576.79186 0.36 51 5
ILYEMGGVPENIAR 1,560.79694 0.41 34.2 2
QIEAGRR 828.45656 0.07 30 1
ILYEMGGVPENIAR 1,592.78677 0.36 82.5 12
LKGISSR 759.46025 0.13 36.5 3
IFPDKPVTVRPAETR 1,724.95731 0.26 37.7 5
MPIKTQFIISE 1,337.69006 0.38 55 5
GNRICFGR 969.44499 0.24 49.8 3