last update : june 2012

Public data retrieved in march 2010



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AT1G32060 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G32060
Master Protein AT1G32060.1
Description (curated) PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding
Calculated MW (PPDB) 44.46
Calculated PI (PPDB) 5.7
Length 395
Curated Annotation
Description (curated) PRK2 (KPPR, PRKASE) phosphoribulokinase 2, phosphopentokinase, chloroplast precursor (EC 2.7.1.19) /
Function (curated) metabolism carbon
Localization (SC) STR
Localization (curated) Ch
Localization (validated) Yes
Envelope spectral count 14.22
Stroma spectral count 83.67
Thylakoid spectral count 2.11
Total spectral count 794
References phosphopentokinase, chloroplast precursor (EC 2.7.1.19), nearly identical to SP:P25697 Phosphoribulokinase (Phosphopentokinase) (PRK) {Arabidopsis thaliana} 'phosphoribulokinase precursor GB:P25697 GI:125576 ( ATP/GTP-binding site motif A (P-loop) (Calvin cycle)
Publication (PPDB)

Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
FYGEVTQQMLK 1,374.64891 0.32 80.9 56
RLTSVFGGAAKPPK 1,427.82481 0.25 73.5 32
LTCSYPGIK 1,028.48482 0.31 30.2 2
FYGEVTQQMLK 1,358.65399 0.31 89.5 18
FNYEPDSYFDHEVSVLEMDGQFDR 2,970.22896 0.56 79.5 5
ILVIEGLHPMFDER 1,667.87045 0.48 76.9 7
GGNPDSNTLISDTTTVICLDDYHSLDR 2,969.31961 0.50 161.9 4
FNYEPDSYFDHEVSVLEMDGQFDR 2,938.23912 0.54 79.1 2
FYGEVTQQMLK 1,342.65907 0.39 71.9 7
ANDFDLMYEQVK 1,471.66528 0.44 87 4
VTALDPR 770.42864 0.20 54.4 61
GGNPDSNTLISDTTTVICLDDYHSLDR 2,921.33487 0.55 86.3 1
KLTCSYPGIK 1,156.57977 0.28 60.4 18
FNYEPDSYFDHEVSVLEMDGQFDR 2,954.23404 0.55 92.7 9
ILVIEGLHPMFDER 1,699.86029 0.43 85.9 87
NGIAVEKPIYNHVTGLLDPPELIQPPK 2,951.61195 0.46 72 13
YFSPVYLFDEGSTISWIPCGR 2,484.13069 0.69 43.7 1
LTSVFGGAAKPPK 1,271.72371 0.27 95.2 91
GHSLESIK 869.46065 0.18 50.5 24
ILVIEGLHPMFDER 1,683.86537 0.42 83.3 29
IRDLYEQLIANK 1,474.81433 0.39 74.8 73
DLYEQLIANK 1,205.62917 0.44 75.1 28
LDELIYVESHLSNLSTK 1,960.01527 0.49 104.8 28
KPDFDAFIDPQKQYADAVIEVLPTTLIPDDNEGK 3,801.89882 0.56 30.6 1
LIMKEGVK 948.53136 0.14 43.8 2
QYADAVIEVLPTTLIPDDNEGK 2,400.20598 0.54 119.1 37
HADFPGSNNGTGLFQTIVGLK 2,172.09628 0.49 154.9 9
NGIAVEK 729.40205 0.18 35.9 1
ANDFDLMYEQVK 1,503.65512 0.37 92.7 77
ANDFDLMYEQVK 1,487.66020 0.37 96.8 20
KPDFDAFIDPQK 1,419.70340 0.37 90 75