last update : june 2012

Public data retrieved in march 2010



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AT2G28000 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT2G28000
Master Protein AT2G28000.1
Description (curated) CPN60A (chloroplast / 60 kDa chaperonin alpha subunit); ATP binding / protein binding / unfolded protein binding
Calculated MW (PPDB) 62.07
Calculated PI (PPDB) 5.08
Length 586
Curated Annotation
Description (curated) RUBA (CPN60A, Cpn60-alpha-1) RuBisCO subunit binding-protein alpha subunit, chloroplast precursor /
Function (curated) chaperone and protease
Localization (SC) STR-ENV
Localization (curated) Ch & other
Localization (validated) Yes
Envelope spectral count 17.35
Stroma spectral count 82.27
Thylakoid spectral count 0.38
Total spectral count 1195
References 60 kDa chaperonin alpha subunit / CPN-60 alpha, identical to SWISS-PROT:P21238- RuBisCO subunit binding-protein alpha subunit, chloroplast precursor (60 kDa chaperonin alpha subunit, CPN-60)
Publication (PPDB)

Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
NATFAAIEEGIVPGGGAALVHLSTVIPAIK 2,915.61191 0.60 81.2 13
DIIPILEK 939.56406 0.42 48 8
AIELPNAMENAGAALIR 1,752.91917 0.51 77.5 4
HGLLSVTSGANPVSLKR 1,734.97400 0.31 118.2 7
DSTTLIADAASKDELQAR 1,903.94867 0.36 103 65
LSGGVAVIK 842.52249 0.26 65.4 34
AALQAGIDKLADCVGLTLGPR 2,129.11498 0.49 87.2 3
ITAIKDIIPILEK 1,465.91193 0.45 101.8 37
GIDKTVQGLIEELQKK 1,798.01994 0.47 69.8 4
TNDSAGDGTTTASILAR 1,649.78563 0.30 148.6 53
HGLLSVTSGANPVSLK 1,578.87289 0.35 115.6 40
VGAATETELEDRK 1,417.70483 0.21 87.5 12
VGAATETELEDR 1,289.60988 0.24 118 80
LLAEFENAR 1,061.55051 0.33 72.3 110
TVQGLIEELQKK 1,384.79253 0.40 73.6 8
NATFAAIEEGIVPGGGAALVHLSTVIPAIKETFEDADER 4,008.04787 0.61 31.8 1
AVASISAGNDDLIGSMIADAIDK 2,278.09979 0.53 178.9 8
ELFETDSVYDSEK 1,560.68310 0.37 86.6 38
KELFETDSVYDSEK 1,688.77806 0.32 98.4 2
DSTTLIADAASK 1,191.59828 0.32 93.1 11
IMFSDWENGYNAMTDTYENLFEAGVIDPAK 3,440.52161 0.68 67.8 1
ALLSPAALIAQNAGVEGEVVVEK 2,277.25789 0.52 132.9 15
GIDKTVQGLIEELQK 1,669.92499 0.50 72.7 6
VLITDQK 815.47525 0.20 57.3 38
CALQNAASVAGMVLTTQAIVVDKPKPK 2,832.47243 0.56 113.1 9
APLLIIAEDVTGEALATLVVNKLR 2,518.47333 0.76 72.6 1
ETFEDADER 1,110.44652 0.22 79 25
EIAFDQHSR 1,101.52029 0.21 60.7 52
AIELPNAMENAGAALIR 1,768.91409 0.41 137 21
APAAAAPEGLMV 1,112.55354 0.37 57.6 6
APAAAAPEGLMV 1,128.54846 0.38 69.9 18
TVQGLIEELQK 1,256.69757 0.45 89.8 39
GRNVVLDEFGSPK 1,416.73605 0.32 71.5 2
LGADIVQK 842.48613 0.23 84.5 31
AALQAGIDK 885.49194 0.21 60.4 14
APGFGER 732.35544 0.20 50 16
VVNDGVTIAR 1,042.57706 0.25 93.2 55
GVLNVVAVK 897.56468 0.33 75.8 44
AALQAGIDKLADCVGLTLGPR 2,081.13023 0.59 43.3 2
ELFETDSVYDSEKLAER 2,029.94797 0.38 97.2 4
LADCVGLTLGPR 1,261.63359 0.42 69.6 11
APLLIIAEDVTGEALATLVVNK 2,249.28816 0.74 140.5 88
GYISPQFVTNPEK 1,478.74049 0.36 113.5 32
ETFEDADERLGADIVQK 1,934.92209 0.37 78.9 5
AIELPNAMENAGAALIR 1,784.90901 0.42 145.3 83
NVVLDEFGSPK 1,203.61350 0.37 79.2 75
AVASISAGNDDLIGSMIADAIDK 2,262.10487 0.51 106.5 1