last update : june 2012

Public data retrieved in march 2010



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AT1G10510 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G10510
Master Protein AT1G10510.1
Description (curated) EMB2004 (EMBRYO DEFECTIVE 2004); protein binding
Calculated MW (PPDB) 64.72
Calculated PI (PPDB) 7.18
Length 605
Curated Annotation
Description (curated) HP73 (EMB2004) similar to ribonuclease inhibitor, contains Leucine Rich Repeat domains /
Function (curated) RNA metabolism?
Localization (SC) ENV
Localization (curated) Ch/E & PG
Localization (validated) Yes
Envelope spectral count 100.00
Stroma spectral count 0.00
Thylakoid spectral count 0.00
Total spectral count 150
References contains Pfam PF00560: Leucine Rich Repeat domains; leucine-rich repeat family protein, contains Pfam PF00560: Leucine Rich Repeat domains. EMB2004 (EMBRYO DEFECTIVE 2004);. Jeon, Y., Hwang, A.-R., Hwang, I., Pai, H.-S.Silencing of NbCEP1 encoding a chloroplast envelope protein containing 15 leucine-rich-repeats disrupts chloroplast biogenesis in Nicotiana benthamiana. Molecules and Cells. 2010; 29 (2):175-183. pubmed:20016945. (NbCEP1 appears to play a critical function, possibly through protein-protein interactions mediated by its LRRs, in chloroplast development in N. benthamiana)
Publication (PPDB)

Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
YNNTISVLDLR 1,306.68808 0.42 89.4 15
DDGAFAIAQALK 1,218.62440 0.46 93 6
VALLDLGNNSISAK 1,413.78268 0.42 100.2 21
GAEHVADMLR 1,113.52365 0.20 44.6 3
VVNEALTSVDLGFNEIR 1,874.97371 0.50 111.8 1
DHVLEMTEK 1,132.50702 0.18 26.8 2
GAFYVAEYIK 1,159.59129 0.43 60 14
ILNLSGNPIGDEGAK 1,496.78340 0.38 124.5 22
FGQSALTDAR 1,064.52504 0.27 82.7 9
ELHLHGNSIGDEGTR 1,633.78079 0.23 79.5 2
ESQAASGFPNAK 1,205.56761 0.21 79.4 22
AFDGVLQSNIMLK 1,450.74895 0.42 51 1
GAEHVADMLR 1,129.51857 0.22 47.3 4
ANGLRDEGASCLAR 1,479.67354 0.26 91.4 2
ALMAGLSSHK 1,045.52260 0.18 48.8 9
ANEDVTVTSINLGNNFITK 2,049.03778 0.46 117.4 9
ALSEILK 772.46942 0.31 44.1 3
DNAIITTLEVGYNPIGPDGAK 2,157.09529 0.53 100.7 4
ALMAGLSSHK 1,013.53276 0.26 29 2
AFDGVLQSNIMLK 1,466.74387 0.44 85.1 4
TSAGENNSSTQGVK 1,378.63240 0.11 92.5 6
EIAELLK 814.47998 0.34 36 2
EIAELLKR 970.58108 0.29 55.6 1
ALMAGLSSHK 1,029.52768 0.17 45.6 1